CDS

Accession Number TCMCG051C17471
gbkey CDS
Protein Id XP_024456216.1
Location join(17199871..17199946,17200044..17200122,17200195..17200274,17200386..17200452,17201555..17201626,17201809..17202018,17202117..17202212,17202321..17202453)
Gene LOC7486602
GeneID 7486602
Organism Populus trichocarpa

Protein

Length 270aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024600448.1
Definition serine/arginine-rich splicing factor SC35 isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category A
Description serine arginine-rich splicing factor
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12891        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
ko05168        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
map05168        [VIEW IN KEGG]
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGCATTTCGGCCGATCTGGTCCTCCAGATATCAGAGACACCTTTTCTCTCCTCGTTCTCAACATCACTTTCCGAACCACTGCCGACGATCTTTTCCCTCTCTTTGACAAGTACGGCAAGGTAGTCGATGTATTCATACCCCGCGATCGGAGGACTGGAGAATCGAGAGGCTTTGCGTTTGTGAGGTATAAATACGCTGAAGAGGCGCAGAAAGCAGTTGATAGGCTTGATGGGAGAGTTGTAGATGGGAGAGAGATTATGGTGCAATTCGCTAAGTATGGGCCCAACGCTGAGCGAATTCGGAGTGGGAGGATAGTGGAATCATCTTCAAAGATTAAAGGTAGGTCCAGAAGCCGCAGCCCTCGTCCAAGGTATCGAGATGGCTATAGGGACAAGGACAAGGATAGGGATTACAGAAGGAGAAGTCGCAGTAGAAGCAAGGATCGTTATGACCGTGATGGGTATCGAGGTAGGGATAGAGATTATCATCCCCGAAGCGTGAGCCACAGCCCAGATCATCGCAAAGAATATGGTAGAGGACATGATGAGAAACGACACCGTCGGAGCCAGTCTCATGGAAGCCCTAATTCTCCAAGGAGCCCTTCTCCACACAGGGCATATCCTAGGGATGGAAGTCCTAATGGACGTAATGATAACAAACACTCACCTAATGGAAGCCCTAATTCTCCAAGGAGCCCTTCTCCACACAGGGCACATCCTAGGGATGGAAGTCCTAATGGACGCAATGATAACAAACGCTCACCTACTTCAAAGAGTGTCTCACCTTGCAATGAACCAGTTGATTCTTGA
Protein:  
MSHFGRSGPPDIRDTFSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFAFVRYKYAEEAQKAVDRLDGRVVDGREIMVQFAKYGPNAERIRSGRIVESSSKIKGRSRSRSPRPRYRDGYRDKDKDRDYRRRSRSRSKDRYDRDGYRGRDRDYHPRSVSHSPDHRKEYGRGHDEKRHRRSQSHGSPNSPRSPSPHRAYPRDGSPNGRNDNKHSPNGSPNSPRSPSPHRAHPRDGSPNGRNDNKRSPTSKSVSPCNEPVDS